Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61845318 | chr10:43494573 | T/C | 4.51E-5 | 288 | 25.7 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845320 | chr10:43496401 | G/A | 4.51E-5 | 288 | 25.7 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845321 | chr10:43497370 | A/G | 5.14E-6 | 288 | 25.67 | 26.52 | 16.12 | KM Plot |
| KIRP | rs61845323 | chr10:43498285 | A/G | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845324 | chr10:43499332 | G/A | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845325 | chr10:43500207 | G/A | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845326 | chr10:43500786 | T/A | 2.76E-6 | 286 | 25.63 | 26.63 | 16.12 | KM Plot |
| KIRP | rs61845327 | chr10:43500953 | G/T | 2.76E-6 | 286 | 25.63 | 26.63 | 16.12 | KM Plot |
| KIRP | rs61845328 | chr10:43501155 | G/T | 2.76E-6 | 286 | 25.63 | 26.63 | 16.12 | KM Plot |
| KIRP | rs61845329 | chr10:43503351 | T/C | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845330 | chr10:43505688 | G/A | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845331 | chr10:43508001 | T/C | 2.84E-6 | 285 | 25.63 | 26.52 | 16.12 | KM Plot |
| KIRP | rs61845332 | chr10:43508630 | C/T | 2.84E-6 | 285 | 25.63 | 26.52 | 16.12 | KM Plot |
| KIRP | rs61845333 | chr10:43511037 | T/C | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61845338 | chr10:43513950 | A/T | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |